CDS

Accession Number TCMCG016C10014
gbkey CDS
Protein Id OMO84671.1
Location complement(join(87838..88539,88916..89023,89360..89474,89763..90832,92156..92255,92342..92850,92929..93124,93243..93367,93474..93539,94506..94694,94795..94830))
Organism Corchorus capsularis
locus_tag CCACVL1_10733

Protein

Length 1071aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01009706.1
Definition hypothetical protein CCACVL1_10733 [Corchorus capsularis]
Locus_tag CCACVL1_10733

EGGNOG-MAPPER Annotation

COG_category S
Description U11 U12 small nuclear ribonucleoprotein 48 kDa
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13156        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGAAGACCGTCAAGTTACGAATTTCAAGTATATGAAAATCATAAACGAGGATGATGACCGGAGTTTTTGGAACTGGTTTAAACAACGTCGTAATAGTGGTGGTGATGGTGATGGTGAAGAGCATGATCCTCCTGATCATCTGGTTGTTTGCACCAAAAGTGGTGCTAGAATTGAGATTTTTGAAGTGAATGGAAAGCAACCTGAATGTGTCTATGCTGAGAATGTTCGTGATATCAGTTTCTCCCCAGGGGAGACCTATGTGGTCACATATATGAGGAATATTAGAGAGTCAAGTTCTGATGCTCAAATTTTCAATATTGAAACTGGACAATGTGAGAAAACATTCCAAGTCCCAACTGAGTTTGTAGATTATATTCCAATTGTTTCATCACAAGCAAATTGGCCTCTAATTAGATGGAGTTGTGGGGACAAATTCTTAGGATTGCTTATGAGAAACTTATTGACATTTTACCGAACAGATGATTTTGCTCCATTCAATTTGAATTTTGAGATTATAGAACAAGTGATAGATTATAGTTTCTCACCAACTGATCCATATGTTGCACTCTTGTTTTCCAACTTTTCTGAACCTAAACACGAATTGGCTTGGATACATATATGGCAATTGACTGATGATTCAACAATATTGTCACTTGGAACACGACTTGCAACTTTAACAAATTGCAAATTCTATTGGCATTCTTCTGGTGATTTTCTTGCTACCATTGCTCAAGCAAATGAAGATGATCCAACATATTTTTATAGTTATGTCACAATTACTTGGATGAGGCACCCAGAATTTGCTTCTCAGGTTTTAAAATTAGAGGGTACAAGTGTTACTGCATTTGCTTGGGAGCCAAATGGTCGTAAATTCGCGATCATTTCTAGTGATAACACTGTCAACTTTTATGTTGTTGATGCTTCGCCGCGCGACTTATCTACATGCCGCATGATTCTTCCCAGCCCTATTAAGGCAAGCAGGCTTTACTGGTCTCCTTTTGGAAACCTCATCCTACTTGCTGGAAATGGAGCCTTGAAATTTTTCAATGTCAATGAAAACATAGTTATAGCTACTGTAAAAACTCATGCCACCCATGTTGAATGGAGTCCTACAGGAAGGTATGTTGCTACATCTGGCAAGGAGGAAGACAGGGTAAAGATATGGTCTGCATATGGAAAACTATTATTGGAGATTGATCCAAGAAATTCATTGTGTCAGGATACACATTTTGAAGGTAAACAAAGCTCGGAACTTTGCCTTTCTTTAGAAGATTATTTTGCTGATTTTGGGTCTAATTTCTTTTATAAAGATTGTCCTGGTGCTGTTAATTTGTTTGATGTTGATAACTCCAACAAAACATTTAGCTTACCGGGTTTTTTATCGGTTGAATGCGTAAATTTTGATGGTTATAATGAGCGAGAGAATGAGGTTAGTGAAAAGAAGGGTTTAAGGATTTTAGCTTCAGGTTTATGGGGAATTCGGAGGGAGGTTGAGAGATGGGGTGATTACCCTGTTTCGTATTCATTCAATGTGGGTTGCGGGATTTTGGGGTCGAAGATGGTGAAAAGAAGTGATTTGAGGAAATGGATAATTGCTAACTCTCCAAAGTATGGTGTTATAATTGATGGTTATATGGGGGATCATATGATTCTGTTGGTTAGGTTATGTTTGAAGGCTATAGCAAGGGAAGCAGCTGTTTTGGTGGAATCACAAGTGGCATATAGAGAACCAAAGGAAAAAAAGGTGGATGCAAATTTGGAGAGGAGAATGTTTGAGTGTCCTATTTTAGTTCAAGTCTTGATGTGGTTAGCTTCTCAGCTTTCTGTTTTGTATGGTGAAGCCAATGGGAAGTTTTTTGCAGTTAATATGATCAAACAATGTGTATTGGAAGGTGCATTGCGGTTGTTGTTGTTACCGTTGGAAGAAAACATGACCAATTTACATAATATGGGGCAAGAATCACAGAGCTTGAGTGCTAATGGTGTTAAGGAAATTAAACTTGAGGAGCCAACTGAAAAAAGTAATGAACCAGTTGTTAACATGACCAATTTACACAATATGGGGCAAGAATCACAGATCTTGAGTGCTAATGGTAATAAGGAAATTACACTTGAGGAGCCAACTAAGAAAAGTAATGAACCAGTTCAAACAACCAATGAAATTATGGGTTTTGGGGTAATATTTGTATCCCAGGTTGCAGCAGCAGTTGCAGCTTTACATGAGCGGCGTTTCCTTGAAGAAAAAATCAAGCATTTTCGGGCTTCCCAACCACTTTCAAGATATCAGAGGATGGCTGAGCATACTTATGTTTCACAGAGAGCTGATATGGAGCGGAAGAAACGTTCTAACTATAGACCCATAATTGATCACGATGGGCTTCCTCGGCATGCATTATCTGATGAGGAAACAAACAGGATTAAAACAAGAGAGGAGATATTGGCCGAAGAACGAGACTACAAAAGAAGAAGAATGTCATATCGTGGGAAAAAATTGAAACGGACAAAATTACAGGTTATGAGGGATATAATAGAGGAATACACAGAAGAAATCAAGAAAGCTGGAGGGATTGGTTGCTTTGTCAAAGGGCCAGAAGAGGAAGGGTCATTACCATCTGAATCTACAGTTACTTATGAACGTGCTCTCGATGCTGGTGAACATAGAAAAGGTACCAGTCACATTTCTGAAGCAGCCAGAGGTAGCCCAGACCGTAACAGGAGAAGATCACACTATGACCAGCATAGATCTACGAGGTTTGAGGATTCTTCAAGTAATGATTTTGAGCAATCAAGATGGCATGACCGCCATGATCTTCTTGAAGATTCGAGGAGAAGCATTAGTAAAGAGCGACATAGAGAAGAGTATGATTCCAGAGCCTCAAAAAGACACAGAGGTTATGAGCAGTCAGATGAGCGAAGAAGCCATAGGAAGGAACGAGATGATGCAGAATCCACTAGAGCTAAGCACTATGAGAGTGGAAGACGATCTAGTACTTCTAAATATAAGGATTACAAATCATCTTATTCAGTATCTGATTCCTCAGCTGACTTTCGTCGAAGAAAGGATGACCTGAAGTTGGATTCTAGAGATAGGAATAGTAGGAACTCATATAATAATACTTCAGGCTCCTGGGCACAGGATGGATTTGATGATAGATATAATCCTTCTGAATCTGATGACATGTATGAAGATGATAAGTATTTCAGGCCAGAGTGA
Protein:  
MEDRQVTNFKYMKIINEDDDRSFWNWFKQRRNSGGDGDGEEHDPPDHLVVCTKSGARIEIFEVNGKQPECVYAENVRDISFSPGETYVVTYMRNIRESSSDAQIFNIETGQCEKTFQVPTEFVDYIPIVSSQANWPLIRWSCGDKFLGLLMRNLLTFYRTDDFAPFNLNFEIIEQVIDYSFSPTDPYVALLFSNFSEPKHELAWIHIWQLTDDSTILSLGTRLATLTNCKFYWHSSGDFLATIAQANEDDPTYFYSYVTITWMRHPEFASQVLKLEGTSVTAFAWEPNGRKFAIISSDNTVNFYVVDASPRDLSTCRMILPSPIKASRLYWSPFGNLILLAGNGALKFFNVNENIVIATVKTHATHVEWSPTGRYVATSGKEEDRVKIWSAYGKLLLEIDPRNSLCQDTHFEGKQSSELCLSLEDYFADFGSNFFYKDCPGAVNLFDVDNSNKTFSLPGFLSVECVNFDGYNERENEVSEKKGLRILASGLWGIRREVERWGDYPVSYSFNVGCGILGSKMVKRSDLRKWIIANSPKYGVIIDGYMGDHMILLVRLCLKAIAREAAVLVESQVAYREPKEKKVDANLERRMFECPILVQVLMWLASQLSVLYGEANGKFFAVNMIKQCVLEGALRLLLLPLEENMTNLHNMGQESQSLSANGVKEIKLEEPTEKSNEPVVNMTNLHNMGQESQILSANGNKEITLEEPTKKSNEPVQTTNEIMGFGVIFVSQVAAAVAALHERRFLEEKIKHFRASQPLSRYQRMAEHTYVSQRADMERKKRSNYRPIIDHDGLPRHALSDEETNRIKTREEILAEERDYKRRRMSYRGKKLKRTKLQVMRDIIEEYTEEIKKAGGIGCFVKGPEEEGSLPSESTVTYERALDAGEHRKGTSHISEAARGSPDRNRRRSHYDQHRSTRFEDSSSNDFEQSRWHDRHDLLEDSRRSISKERHREEYDSRASKRHRGYEQSDERRSHRKERDDAESTRAKHYESGRRSSTSKYKDYKSSYSVSDSSADFRRRKDDLKLDSRDRNSRNSYNNTSGSWAQDGFDDRYNPSESDDMYEDDKYFRPE